.. DNAfold documentation master file, created by
   sphinx-quickstart on Thu Mar  6 15:07:13 2025.
   You can adapt this file completely to your liking, but it should at least
   contain the root `toctree` directive.

Welcome to DNAfold's documentation!
===================================

DNAfold is a physics engine for mesoscopic Brownian dynamics simulations of DNA origami self-assembly. See our publication in Nature Communications `here <https://doi.org/10.1038/s41467-024-46998-y>`_.

.. toctree::
   :maxdepth: 2
   :caption: Contents:

   page_run_code
   page_params
   page_cadnano_ex

Indices and tables
==================

* :ref:`genindex`
* :ref:`search`