Welcome to DNAfold’s documentation!

DNAfold is a physics engine for mesoscopic Brownian dynamics simulations of DNA origami self-assembly. See our publication in Nature Communications here.

Contents:

• Running the Code
  • Requirements
  • Cloning
  • Running
  • Visualization
• Parameter Descriptions
  • Simulation Units
  • File Input/Output
  • Computational
  • Simulation Conditions
• caDNAno Examples
  • Incorrect 2D Structure
  • Correct 2D Structure
  • Incorrect 3D structure
  • Correct 3D structure
  • Smiley Face

Indices and tables

• Index

• Search Page